Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vwa domain-containing protein | SB49_RS12945 | Not Available | Negative | 2904141 - 2905187 | 39198.6 |
| vwa domain-containing protein | SB49_RS12950 | Not Available | Negative | 2905190 - 2906188 | 37059.1 |
| batd family protein | SB49_RS12955 | Not Available | Negative | 2906188 - 2907849 | 62535.1 |
| duf58 domain-containing protein | SB49_RS12960 | Not Available | Negative | 2907855 - 2908721 | 33364.3 |
| moxr family atpase | SB49_RS12965 | Not Available | Negative | 2908798 - 2909799 | 37418.7 |
| aldo/keto reductase family oxidoreductase | SB49_RS12970 | Not Available | Positive | 2909958 - 2910833 | 33112.6 |
| sdr family nad(p)-dependent oxidoreductase | SB49_RS12975 | Not Available | Positive | 2910891 - 2911652 | 27468.2 |
| atp-binding protein | SB49_RS12980 | Not Available | Positive | 2911649 - 2912785 | 43759.4 |
| alpha-amylase family protein | SB49_RS12985 | Not Available | Negative | 2912782 - 2914722 | 74558.1 |
| carbohydrate kinase | SB49_RS12990 | Not Available | Negative | 2914724 - 2915668 | 33982.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
