Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidase family protein | SB49_RS01225 | Not Available | Positive | 275944 - 277626 | 61440.9 |
| serine hydrolase | SB49_RS01230 | Not Available | Negative | 277639 - 278766 | 42085.6 |
| 30s ribosomal protein s12 methylthiotransferase rimo | SB49_RS01235 | Not Available | Positive | 278892 - 280193 | 49374.1 |
| dmt family transporter | SB49_RS01240 | Not Available | Negative | 280150 - 281106 | 35198.8 |
| abc-f family atp-binding cassette domain-containing protein | SB49_RS01245 | Not Available | Positive | 281246 - 282883 | 62293.8 |
| 4-hydroxy-tetrahydrodipicolinate reductase | SB49_RS01250 | Not Available | Negative | 282939 - 283742 | 28359.1 |
| hypothetical protein | SB49_RS01255 | Not Available | Negative | 283760 - 284035 | 10873.7 |
| marr family winged helix-turn-helix transcriptional regulator | SB49_RS01260 | Not Available | Negative | 284028 - 284513 | 18758.4 |
| p-loop atpase, sll1717 family | SB49_RS01265 | Not Available | Negative | 284778 - 286268 | 57491.0 |
| hypothetical protein | SB49_RS01270 | Not Available | Negative | 286475 - 287101 | 24507.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
