Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylglycinamide formyltransferase | SB49_RS12845 | Not Available | Negative | 2885575 - 2886141 | 21153.6 |
| acyl carrier protein | SB49_RS12850 | Not Available | Positive | 2886299 - 2886532 | 8419.77 |
| beta-ketoacyl-acp synthase ii | SB49_RS12855 | Not Available | Positive | 2886644 - 2887894 | 44323.8 |
| ribonuclease iii | SB49_RS12860 | Not Available | Positive | 2887902 - 2888642 | 28339.1 |
| ipexxxvdy family protein | SB49_RS12865 | Not Available | Positive | 2888749 - 2889213 | 17972.4 |
| pyruvate kinase | SB49_RS12870 | Not Available | Positive | 2889218 - 2890654 | 52785.4 |
| pas domain-containing protein | SB49_RS12875 | Not Available | Negative | 2890724 - 2891236 | 19700.5 |
| dna polymerase iv | SB49_RS12880 | Not Available | Negative | 2891537 - 2892634 | 41267.9 |
| nad(p)h-binding protein | SB49_RS12885 | Not Available | Positive | 2892663 - 2893331 | 25013.6 |
| cyth domain-containing protein | SB49_RS12890 | Not Available | Positive | 2893349 - 2893822 | 18389.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
