Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,4-alpha-glucan branching protein glgb | SB49_RS12795 | Not Available | Positive | 2868992 - 2870887 | 73161.2 |
| sdr family oxidoreductase | SB49_RS12800 | Not Available | Positive | 2871071 - 2871784 | 25472.5 |
| pd-(d/e)xk nuclease family protein | SB49_RS12805 | Not Available | Negative | 2871787 - 2874537 | 105080.0 |
| ompa family protein | SB49_RS12810 | Not Available | Negative | 2874682 - 2876022 | 47368.7 |
| glycine c-acetyltransferase | SB49_RS12815 | Not Available | Negative | 2876137 - 2877330 | 43588.5 |
| exodeoxyribonuclease v subunit beta | SB49_RS12820 | Not Available | Negative | 2877343 - 2880477 | 119050.0 |
| superoxide dismutase | SB49_RS12825 | Not Available | Positive | 2880581 - 2881189 | 22502.3 |
| hypothetical protein | SB49_RS12830 | Not Available | Negative | 2882133 - 2884031 | 72063.8 |
| pfkb family carbohydrate kinase | SB49_RS12835 | Not Available | Negative | 2884075 - 2885001 | 34059.9 |
| ribonuclease hi | SB49_RS12840 | Not Available | Negative | 2885106 - 2885582 | 18497.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
