Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6730 family protein | SB49_RS12745 | Not Available | Positive | 2856518 - 2856991 | 18855.3 |
| site-specific integrase | SB49_RS12750 | Not Available | Negative | 2857107 - 2858324 | 47436.4 |
| arac family transcriptional regulator | SB49_RS12755 | Not Available | Negative | 2858787 - 2859692 | 34553.1 |
| nuclear transport factor 2 family protein | SB49_RS12760 | Not Available | Positive | 2859912 - 2860367 | 17503.6 |
| nuclear transport factor 2 family protein | SB49_RS12765 | Not Available | Positive | 2860360 - 2860842 | 18527.6 |
| hypothetical protein | SB49_RS12770 | Not Available | Negative | 2861010 - 2861567 | 19359.4 |
| tonb-dependent receptor domain-containing protein | SB49_RS12775 | Not Available | Negative | 2861584 - 2863983 | 89738.7 |
| hypothetical protein | SB49_RS12780 | Not Available | Negative | 2864953 - 2865156 | 7906.98 |
| alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase | SB49_RS12785 | Not Available | Positive | 2865410 - 2867347 | 75008.7 |
| maltokinase n-terminal cap-like domain-containing protein | SB49_RS12790 | Not Available | Positive | 2867352 - 2868983 | 63924.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
