Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6624 domain-containing protein | SB49_RS12695 | Not Available | Positive | 2847091 - 2847780 | 26638.2 |
| hypothetical protein | SB49_RS12700 | Not Available | Positive | 2847991 - 2848794 | 31653.5 |
| s41 family peptidase | SB49_RS12705 | Not Available | Positive | 2848983 - 2850425 | 56073.7 |
| tetratricopeptide repeat protein | SB49_RS12710 | Not Available | Positive | 2850667 - 2851371 | 27142.3 |
| gnat family n-acetyltransferase | SB49_RS12715 | Not Available | Positive | 2851532 - 2852083 | 21130.2 |
| hypothetical protein | SB49_RS16270 | Not Available | Positive | 2852626 - 2852748 | 4679.81 |
| primase-helicase family protein | SB49_RS12725 | Not Available | Positive | 2852968 - 2854173 | 47070.5 |
| toprim domain-containing protein | SB49_RS12730 | Not Available | Positive | 2854381 - 2855337 | 36666.0 |
| mobilization protein mbpa | SB49_RS12735 | Not Available | Positive | 2855334 - 2855636 | 11994.7 |
| relaxase/mobilization nuclease domain-containing protein | SB49_RS12740 | Not Available | Positive | 2855636 - 2856505 | 32828.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
