Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2og-fe(ii) oxygenase | SB49_RS12595 | Not Available | Positive | 2829453 - 2830091 | 25011.8 |
| duf4199 domain-containing protein | SB49_RS12600 | Not Available | Negative | 2830233 - 2830709 | 17860.3 |
| enoyl-coa hydratase/isomerase family protein | SB49_RS12605 | Not Available | Negative | 2830738 - 2831505 | 27692.0 |
| mate family efflux transporter | SB49_RS12610 | Not Available | Negative | 2831531 - 2832865 | 48852.5 |
| gnat family n-acetyltransferase | SB49_RS12615 | Not Available | Negative | 2832877 - 2833377 | 19300.1 |
| universal stress protein | SB49_RS12620 | Not Available | Positive | 2833432 - 2834232 | 29779.4 |
| Trna-ala | Not Available | Not Available | Positive | 2834305 - 2834381 | Not Available |
| hypothetical protein | SB49_RS12630 | Not Available | Positive | 2834830 - 2835312 | 18436.4 |
| hypothetical protein | SB49_RS12635 | Not Available | Positive | 2835767 - 2836285 | 20167.0 |
| smi1/knr4 family protein | SB49_RS12640 | Not Available | Positive | 2836531 - 2837130 | 22700.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
