Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidine kinase | SB49_RS12545 | Not Available | Negative | 2819621 - 2820268 | 24367.2 |
| hypothetical protein | SB49_RS12550 | Not Available | Positive | 2820452 - 2821147 | 26279.4 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | SB49_RS12555 | Not Available | Positive | 2821233 - 2821904 | 24490.9 |
| duf819 family protein | SB49_RS12560 | Not Available | Positive | 2821943 - 2823070 | 41686.9 |
| adenine deaminase | SB49_RS12565 | Not Available | Negative | 2823104 - 2824726 | 59047.5 |
| carboxymuconolactone decarboxylase family protein | SB49_RS12570 | Not Available | Negative | 2824727 - 2825317 | 22101.1 |
| osmc family protein | SB49_RS12575 | Not Available | Positive | 2825373 - 2825795 | 15824.2 |
| single-stranded-dna-specific exonuclease recj | SB49_RS12580 | Not Available | Positive | 2825854 - 2827542 | 62317.6 |
| udp-2,3-diacylglucosamine diphosphatase | SB49_RS12585 | Not Available | Negative | 2827989 - 2828756 | 29668.5 |
| 6-carboxytetrahydropterin synthase | SB49_RS12590 | Not Available | Negative | 2828766 - 2829218 | 17104.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
