Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-binding oxidoreductase | SB49_RS12495 | Not Available | Positive | 2809421 - 2810533 | 41210.8 |
| 3-oxoacyl-acp synthase | SB49_RS12500 | Not Available | Positive | 2810548 - 2811006 | 16861.3 |
| alternative ribosome rescue aminoacyl-trna hydrolase arfb | SB49_RS12505 | Not Available | Negative | 2811022 - 2811426 | 15351.9 |
| abc transporter atp-binding protein | SB49_RS12510 | Not Available | Negative | 2811432 - 2812406 | 36943.5 |
| prolyl oligopeptidase family protein | SB49_RS12515 | Not Available | Negative | 2812500 - 2814656 | 80834.6 |
| s8 family peptidase | SB49_RS12520 | Not Available | Positive | 2814942 - 2816183 | 42133.0 |
| aspartate-semialdehyde dehydrogenase | SB49_RS12525 | Not Available | Negative | 2816262 - 2817251 | 36195.6 |
| gnat family n-acetyltransferase | SB49_RS12530 | Not Available | Negative | 2817345 - 2817884 | 21169.6 |
| large conductance mechanosensitive channel protein mscl | SB49_RS12535 | Not Available | Negative | 2818029 - 2818451 | 15001.5 |
| alanine racemase | SB49_RS12540 | Not Available | Negative | 2818516 - 2819628 | 41128.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
