Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxylate-amine ligase | SB49_RS12445 | Not Available | Positive | 2800305 - 2801402 | 42412.1 |
| type 1 glutamine amidotransferase | SB49_RS12450 | Not Available | Positive | 2801436 - 2802308 | 33433.8 |
| hypothetical protein | SB49_RS12455 | Not Available | Positive | 2802305 - 2803501 | 46329.8 |
| riboflavin synthase | SB49_RS12460 | Not Available | Negative | 2803513 - 2804103 | 21722.9 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | SB49_RS12465 | Not Available | Positive | 2804162 - 2805214 | 38382.1 |
| duf177 domain-containing protein | SB49_RS12470 | Not Available | Positive | 2805394 - 2805930 | 20590.4 |
| 50s ribosomal protein l32 | SB49_RS12475 | Not Available | Positive | 2805939 - 2806136 | 7667.24 |
| beta-ketoacyl-acp synthase iii | SB49_RS12480 | Not Available | Positive | 2806308 - 2807303 | 36107.1 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | SB49_RS12485 | Not Available | Positive | 2807347 - 2807832 | 17362.8 |
| acetyl-coa carboxylase biotin carboxylase subunit | SB49_RS12490 | Not Available | Positive | 2807924 - 2809276 | 50157.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
