Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrolipoamide acetyltransferase family protein | SB49_RS01180 | Not Available | Positive | 268529 - 269878 | 48655.0 |
| 3'-5' exonuclease | SB49_RS01185 | Not Available | Positive | 270304 - 271080 | 29457.2 |
| fumarylacetoacetate hydrolase family protein | SB49_RS01190 | Not Available | Positive | 271164 - 271775 | 23085.8 |
| hpt domain-containing protein | SB49_RS01195 | Not Available | Positive | 271775 - 272113 | 12637.1 |
| competence/damage-inducible protein a | SB49_RS01200 | Not Available | Positive | 272113 - 273360 | 45579.0 |
| 50s ribosomal protein l28 | SB49_RS01205 | Not Available | Positive | 273434 - 273670 | 8863.03 |
| 50s ribosomal protein l33 | SB49_RS01210 | Not Available | Positive | 273692 - 273874 | 7018.8 |
| duf4295 domain-containing protein | SB49_RS15840 | Not Available | Positive | 273881 - 274036 | 5706.17 |
| signal recognition particle-docking protein ftsy | SB49_RS01215 | Not Available | Positive | 274125 - 275087 | 34831.0 |
| duf2911 domain-containing protein | SB49_RS01220 | Not Available | Positive | 275084 - 275938 | 32451.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
