Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium:proton antiporter | SB49_RS12340 | Not Available | Positive | 2776147 - 2778003 | 67687.8 |
| translation elongation factor 4 | SB49_RS12345 | Not Available | Negative | 2778053 - 2779849 | 66555.6 |
| outer membrane beta-barrel family protein | SB49_RS12355 | Not Available | Positive | 2780046 - 2782460 | 91010.5 |
| trna dihydrouridine synthase dusb | SB49_RS12360 | Not Available | Positive | 2782515 - 2783513 | 37485.5 |
| abc transporter permease | SB49_RS12365 | Not Available | Negative | 2783572 - 2784780 | 44724.8 |
| 30s ribosome-binding factor rbfa | SB49_RS12370 | Not Available | Negative | 2784783 - 2785175 | 14791.0 |
| methylmalonyl-coa epimerase | SB49_RS12375 | Not Available | Positive | 2785247 - 2785651 | 15012.3 |
| Trna-met | Not Available | Not Available | Positive | 2785729 - 2785802 | Not Available |
| hypothetical protein | SB49_RS12385 | Not Available | Negative | 2786428 - 2788206 | 63708.8 |
| yiix/yebb-like n1pc/p60 family cysteine hydrolase | SB49_RS12390 | Not Available | Negative | 2788685 - 2790145 | 55717.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
