Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s41 family peptidase | SB49_RS12290 | Not Available | Negative | 2761014 - 2762642 | 60996.9 |
| ribonuclease p protein component | SB49_RS12295 | Not Available | Negative | 2762626 - 2763012 | 15056.6 |
| cbs domain-containing protein | SB49_RS12300 | Not Available | Positive | 2763144 - 2765003 | 71094.4 |
| succinylglutamate desuccinylase/aspartoacylase family protein | SB49_RS12305 | Not Available | Positive | 2765006 - 2766214 | 45743.6 |
| m1 family metallopeptidase | SB49_RS12310 | Not Available | Negative | 2766275 - 2768110 | 69870.4 |
| s8 family peptidase | SB49_RS12315 | Not Available | Negative | 2768150 - 2769787 | 58421.6 |
| mbl fold metallo-hydrolase | SB49_RS12320 | Not Available | Negative | 2769810 - 2770670 | 32703.8 |
| cation:proton antiporter | SB49_RS12325 | Not Available | Positive | 2770917 - 2772938 | 75320.5 |
| sulp family inorganic anion transporter | SB49_RS12330 | Not Available | Negative | 2772948 - 2775176 | 82624.7 |
| universal stress protein | SB49_RS12335 | Not Available | Negative | 2775173 - 2776036 | 32701.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
