Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SB49_RS12240 | Not Available | Negative | 2751697 - 2752464 | 29062.2 |
| ester cyclase | SB49_RS12245 | Not Available | Negative | 2752467 - 2753012 | 20411.6 |
| sensor histidine kinase | SB49_RS12250 | Not Available | Positive | 2753211 - 2755172 | 74955.3 |
| lyttr family dna-binding domain-containing protein | SB49_RS12255 | Not Available | Negative | 2755169 - 2755912 | 28195.3 |
| ykgj family cysteine cluster protein | SB49_RS12260 | Not Available | Negative | 2756064 - 2756672 | 22766.6 |
| duf4174 domain-containing protein | SB49_RS12265 | Not Available | Negative | 2756777 - 2757235 | 17727.0 |
| cold-shock protein | SB49_RS12270 | Not Available | Negative | 2757323 - 2757514 | 7003.38 |
| chloramphenicol acetyltransferase | SB49_RS12275 | Not Available | Negative | 2757624 - 2758253 | 24536.0 |
| nucleoside deaminase | SB49_RS12280 | Not Available | Negative | 2758270 - 2758746 | 17853.2 |
| s9 family peptidase | SB49_RS12285 | Not Available | Negative | 2758861 - 2760867 | 75312.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
