Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine--trna ligase/yqey domain fusion protein | SB49_RS12090 | Not Available | Positive | 2723342 - 2725027 | 64876.7 |
| ytxh domain-containing protein | SB49_RS12095 | Not Available | Positive | 2725382 - 2725711 | 12091.6 |
| hypothetical protein | SB49_RS12100 | Not Available | Positive | 2725718 - 2726068 | 13059.3 |
| duf6327 family protein | SB49_RS12105 | Not Available | Positive | 2726065 - 2726283 | 8541.65 |
| spfh domain-containing protein | SB49_RS12110 | Not Available | Negative | 2726369 - 2727316 | 35196.0 |
| glutamate--trna ligase | SB49_RS12115 | Not Available | Negative | 2727493 - 2729004 | 58021.2 |
| hypothetical protein | SB49_RS12120 | Not Available | Positive | 2729454 - 2732774 | 125874.0 |
| rrna maturation rnase ybey | SB49_RS12125 | Not Available | Positive | 2732767 - 2733186 | 16675.4 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | SB49_RS12130 | Not Available | Positive | 2733196 - 2735064 | 69475.0 |
| class i sam-dependent methyltransferase | SB49_RS12135 | Not Available | Positive | 2735307 - 2736134 | 31899.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
