Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate kinase | SB49_RS12045 | Not Available | Negative | 2696443 - 2697636 | 42548.1 |
| atp-binding protein | SB49_RS12050 | Not Available | Positive | 2697854 - 2699005 | 43492.6 |
| hypothetical protein | SB49_RS12055 | Not Available | Positive | 2699042 - 2699443 | 14669.5 |
| Trna-cys | Not Available | Not Available | Positive | 2699503 - 2699576 | Not Available |
| Trna-pseudo | Not Available | Not Available | Positive | 2699750 - 2699824 | Not Available |
| dihydroneopterin aldolase | SB49_RS12065 | Not Available | Negative | 2699882 - 2700238 | 13344.1 |
| type ix secretion system membrane protein porp/sprf | SB49_RS12070 | Not Available | Negative | 2700284 - 2701231 | 36332.7 |
| t9ss type b sorting domain-containing protein | SB49_RS12075 | Not Available | Negative | 2701254 - 2718158 | 590914.0 |
| porp/sprf family type ix secretion system membrane protein | SB49_RS12080 | Not Available | Negative | 2718711 - 2720792 | 79289.2 |
| gliding motility-associated c-terminal domain-containing protein | SB49_RS12085 | Not Available | Negative | 2720822 - 2723080 | 80889.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
