Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SB49_RS12005 | Not Available | Negative | 2683761 - 2684816 | 39885.2 |
| duf6909 family protein | SB49_RS12010 | Not Available | Negative | 2684820 - 2686505 | 63653.7 |
| gh3 auxin-responsive promoter family protein | SB49_RS12015 | Not Available | Negative | 2686592 - 2688091 | 57178.4 |
| m23 family metallopeptidase | SB49_RS12020 | Not Available | Negative | 2688099 - 2688968 | 32759.5 |
| twin-arginine translocase tata/tate family subunit | SB49_RS12025 | Not Available | Positive | 2689168 - 2689359 | 6943.67 |
| ompa family protein | SB49_RS12030 | Not Available | Positive | 2689744 - 2692356 | 98894.3 |
| duf6747 family protein | SB49_RS16130 | Not Available | Positive | 2692707 - 2692877 | 6680.52 |
| duf6747 family protein | SB49_RS16135 | Not Available | Positive | 2693242 - 2693412 | 6530.22 |
| duf4837 family protein | SB49_RS12035 | Not Available | Negative | 2693678 - 2694673 | 37443.7 |
| lytic transglycosylase domain-containing protein | SB49_RS12040 | Not Available | Negative | 2694694 - 2696322 | 61674.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
