Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | SB49_RS11955 | Not Available | Negative | 2677148 - 2677888 | 28354.2 |
| hypothetical protein | SB49_RS11960 | Not Available | Negative | 2677878 - 2678210 | 12605.9 |
| nuclear transport factor 2 family protein | SB49_RS11965 | Not Available | Negative | 2678217 - 2678561 | 13202.0 |
| glycosyltransferase family 2 protein | SB49_RS11970 | Not Available | Negative | 2678548 - 2679279 | 28226.9 |
| had family phosphatase | SB49_RS11975 | Not Available | Negative | 2679266 - 2679901 | 24337.6 |
| hypothetical protein | SB49_RS11980 | Not Available | Negative | 2679894 - 2680523 | 24719.3 |
| dtdp-4-dehydrorhamnose reductase | SB49_RS11985 | Not Available | Negative | 2680541 - 2681323 | 29625.1 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SB49_RS11990 | Not Available | Negative | 2681320 - 2681865 | 20587.8 |
| glucose-1-phosphate thymidylyltransferase rfba | SB49_RS11995 | Not Available | Negative | 2681891 - 2682748 | 31543.2 |
| dtdp-glucose 4,6-dehydratase | SB49_RS12000 | Not Available | Negative | 2682750 - 2683757 | 37722.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
