Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6341 family protein | SB49_RS11905 | Not Available | Positive | 2665904 - 2666125 | 8791.57 |
| phosphoribosylamine--glycine ligase | SB49_RS11910 | Not Available | Negative | 2666208 - 2667482 | 46139.5 |
| udp-glucuronic acid decarboxylase family protein | SB49_RS11915 | Not Available | Negative | 2667573 - 2668559 | 37379.8 |
| undecaprenyl-phosphate glucose phosphotransferase | SB49_RS11920 | Not Available | Negative | 2668663 - 2670015 | 53242.3 |
| glycosyltransferase | SB49_RS11925 | Not Available | Negative | 2670091 - 2671206 | 43232.1 |
| o-antigen ligase family protein | SB49_RS11930 | Not Available | Negative | 2671537 - 2672742 | 47316.5 |
| hypothetical protein | SB49_RS11935 | Not Available | Negative | 2672729 - 2674009 | 49058.5 |
| glycosyltransferase | SB49_RS11940 | Not Available | Negative | 2674009 - 2675091 | 41601.4 |
| hypothetical protein | SB49_RS11945 | Not Available | Negative | 2675139 - 2676362 | 47859.6 |
| hypothetical protein | SB49_RS11950 | Not Available | Negative | 2676353 - 2677144 | 31144.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
