Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | SB49_RS11860 | Not Available | Positive | 2653943 - 2657146 | 117387.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | SB49_RS11865 | Not Available | Positive | 2657156 - 2658607 | 54160.5 |
| sodium:solute symporter | SB49_RS11870 | Not Available | Positive | 2658679 - 2660013 | 49038.9 |
| mbl fold metallo-hydrolase | SB49_RS11875 | Not Available | Positive | 2659998 - 2660615 | 22918.2 |
| arsenosugar biosynthesis-associated peroxidase-like protein | SB49_RS15905 | Not Available | Positive | 2660874 - 2661209 | 12442.0 |
| arsenosugar biosynthesis radical sam (seleno)protein arss | SB49_RS11880 | Not Available | Positive | 2661317 - 2662372 | 39733.4 |
| tetr/acrr family transcriptional regulator | SB49_RS11885 | Not Available | Positive | 2662608 - 2663222 | 23770.8 |
| glycosyltransferase family 9 protein | SB49_RS11890 | Not Available | Negative | 2663232 - 2664305 | 39239.1 |
| duf4254 domain-containing protein | SB49_RS11895 | Not Available | Negative | 2664289 - 2664894 | 23781.3 |
| duf6427 family protein | SB49_RS11900 | Not Available | Negative | 2664926 - 2665864 | 36111.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
