Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide assembly protein lapb | SB49_RS11810 | Not Available | Negative | 2642795 - 2645353 | 98964.1 |
| abc transporter atp-binding protein | SB49_RS11815 | Not Available | Negative | 2645497 - 2646192 | 25638.8 |
| duf5687 family protein | SB49_RS11820 | Not Available | Negative | 2646222 - 2647694 | 56171.8 |
| hypothetical protein | SB49_RS11825 | Not Available | Negative | 2647753 - 2648445 | 27789.7 |
| hypothetical protein | SB49_RS11830 | Not Available | Negative | 2648442 - 2649080 | 25063.3 |
| padr family transcriptional regulator | SB49_RS11835 | Not Available | Negative | 2649091 - 2649429 | 12851.7 |
| ferredoxin--nadp reductase | SB49_RS11840 | Not Available | Positive | 2649552 - 2650601 | 38757.4 |
| patatin-like phospholipase family protein | SB49_RS11845 | Not Available | Negative | 2650655 - 2651452 | 29045.3 |
| nadp-dependent oxidoreductase | SB49_RS11850 | Not Available | Negative | 2651884 - 2652879 | 35970.7 |
| duf2064 domain-containing protein | SB49_RS11855 | Not Available | Positive | 2653179 - 2653874 | 25992.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
