Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SB49_RS11705 | Not Available | Negative | 2624991 - 2625749 | 29478.7 |
| tryptophan--trna ligase | SB49_RS11710 | Not Available | Positive | 2625822 - 2626790 | 36207.4 |
| dna-processing protein dpra | SB49_RS11715 | Not Available | Negative | 2627066 - 2628169 | 40948.4 |
| spor domain-containing protein | SB49_RS11720 | Not Available | Positive | 2628274 - 2629218 | 35661.5 |
| acyl-coa thioesterase | SB49_RS11725 | Not Available | Positive | 2629276 - 2629791 | 18897.8 |
| murein hydrolase activator envc | SB49_RS11730 | Not Available | Negative | 2629825 - 2631054 | 46989.3 |
| duf4292 domain-containing protein | SB49_RS11735 | Not Available | Negative | 2631056 - 2631835 | 29852.1 |
| lipopolysaccharide assembly protein lapb | SB49_RS11740 | Not Available | Negative | 2631847 - 2632767 | 34970.6 |
| sugar phosphate nucleotidyltransferase | SB49_RS11745 | Not Available | Negative | 2632793 - 2633809 | 37098.8 |
| dutp diphosphatase | SB49_RS11750 | Not Available | Negative | 2633905 - 2634339 | 15458.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
