Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coa transferase subunit b | SB49_RS11655 | Not Available | Negative | 2614292 - 2614945 | 23073.3 |
| coa transferase subunit a | SB49_RS11660 | Not Available | Negative | 2614948 - 2615649 | 25437.6 |
| penicillin-binding protein 1a | SB49_RS11665 | Not Available | Negative | 2615761 - 2618091 | 87754.8 |
| gliding motility lipoprotein gldh | SB49_RS11670 | Not Available | Negative | 2618091 - 2618573 | 18329.8 |
| regulatory iron-sulfur-containing complex subunit rict | SB49_RS11675 | Not Available | Negative | 2618566 - 2619750 | 45029.6 |
| rhodanese-related sulfurtransferase | SB49_RS11680 | Not Available | Negative | 2619986 - 2621017 | 39444.0 |
| recombinase reca | SB49_RS11685 | Not Available | Positive | 2621325 - 2622332 | 36294.9 |
| hypothetical protein | SB49_RS11690 | Not Available | Positive | 2622421 - 2622843 | 15970.5 |
| rna polymerase sigma factor | SB49_RS11695 | Not Available | Positive | 2622881 - 2623414 | 20565.0 |
| outer membrane beta-barrel protein | SB49_RS11700 | Not Available | Positive | 2623433 - 2624920 | 54064.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
