Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase | SB49_RS11605 | Not Available | Positive | 2601617 - 2604475 | 105793.0 |
| hypothetical protein | SB49_RS11610 | Not Available | Positive | 2604662 - 2605558 | 35165.6 |
| succinylglutamate desuccinylase/aspartoacylase family protein | SB49_RS11615 | Not Available | Negative | 2605637 - 2606677 | 38815.1 |
| succinate dehydrogenase cytochrome b subunit | SB49_RS11620 | Not Available | Positive | 2606929 - 2607597 | 25307.0 |
| fumarate reductase/succinate dehydrogenase flavoprotein subunit | SB49_RS11625 | Not Available | Positive | 2607600 - 2609603 | 74170.8 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | SB49_RS11630 | Not Available | Positive | 2609657 - 2610403 | 27160.4 |
| very short patch repair endonuclease | SB49_RS11635 | Not Available | Positive | 2610513 - 2610992 | 19270.5 |
| methionine aminotransferase | SB49_RS11640 | Not Available | Positive | 2611057 - 2612214 | 43470.0 |
| serine hydrolase | SB49_RS11645 | Not Available | Negative | 2612211 - 2613365 | 43589.0 |
| gnat family n-acetyltransferase | SB49_RS11650 | Not Available | Negative | 2613390 - 2613884 | 19558.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
