Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class v-fold plp-dependent enzyme | SB49_RS11560 | Not Available | Negative | 2591122 - 2592348 | 44908.2 |
| fe-s cluster assembly protein sufd | SB49_RS11565 | Not Available | Negative | 2592517 - 2593833 | 49508.8 |
| fe-s cluster assembly atpase sufc | SB49_RS11570 | Not Available | Negative | 2593903 - 2594655 | 27705.4 |
| fe-s cluster assembly protein sufb | SB49_RS11575 | Not Available | Negative | 2594706 - 2596151 | 53917.7 |
| iron-sulfur cluster assembly accessory protein | SB49_RS11580 | Not Available | Negative | 2596211 - 2596540 | 11876.0 |
| hypothetical protein | SB49_RS11585 | Not Available | Negative | 2596766 - 2596984 | 8124.73 |
| thiamine-phosphate kinase | SB49_RS11590 | Not Available | Positive | 2597091 - 2598140 | 38267.6 |
| hypothetical protein | SB49_RS15900 | Not Available | Negative | 2598141 - 2598395 | 9761.7 |
| branched-chain amino acid transport system ii carrier protein | SB49_RS11595 | Not Available | Positive | 2598667 - 2599956 | 46754.5 |
| aminopeptidase p family protein | SB49_RS11600 | Not Available | Negative | 2600045 - 2601337 | 49479.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
