Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3'-5' exonuclease | SB49_RS11510 | Not Available | Positive | 2580917 - 2581630 | 27971.6 |
| s8 family serine peptidase | SB49_RS11515 | Not Available | Negative | 2581627 - 2583837 | 79542.1 |
| endonuclease/exonuclease/phosphatase family protein | SB49_RS11520 | Not Available | Negative | 2584030 - 2585004 | 37677.5 |
| gtpase hflx | SB49_RS11525 | Not Available | Positive | 2585081 - 2586292 | 46875.3 |
| duf3078 domain-containing protein | SB49_RS11530 | Not Available | Negative | 2586983 - 2587915 | 34770.0 |
| duf2480 family protein | SB49_RS11535 | Not Available | Negative | 2587984 - 2588487 | 19090.2 |
| suf system fe-s cluster assembly protein | SB49_RS11540 | Not Available | Negative | 2588516 - 2588845 | 12405.9 |
| sufe family protein | SB49_RS11545 | Not Available | Negative | 2588888 - 2589310 | 16173.6 |
| hypothetical protein | SB49_RS11550 | Not Available | Negative | 2589348 - 2589779 | 16195.5 |
| zinc metalloprotease | SB49_RS11555 | Not Available | Negative | 2589854 - 2590915 | 37997.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
