Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxymethylbilane synthase | SB49_RS11460 | Not Available | Positive | 2572327 - 2573241 | 33273.4 |
| uroporphyrinogen-iii synthase | SB49_RS11465 | Not Available | Positive | 2573280 - 2573966 | 25353.5 |
| uroporphyrinogen decarboxylase | SB49_RS11470 | Not Available | Positive | 2573984 - 2575012 | 38347.6 |
| duf6973 domain-containing protein | SB49_RS11475 | Not Available | Positive | 2575039 - 2575500 | 18177.9 |
| oxygen-dependent coproporphyrinogen oxidase | SB49_RS11480 | Not Available | Positive | 2575504 - 2576406 | 34728.9 |
| ychj family protein | SB49_RS11485 | Not Available | Positive | 2576419 - 2576805 | 14680.2 |
| porphobilinogen synthase | SB49_RS11490 | Not Available | Positive | 2576898 - 2577872 | 35879.3 |
| dinb family protein | SB49_RS11495 | Not Available | Positive | 2577981 - 2578490 | 19697.6 |
| cnnm domain-containing protein | SB49_RS11500 | Not Available | Positive | 2578856 - 2579977 | 41448.0 |
| methylated-dna--[protein]-cysteine s-methyltransferase | SB49_RS11505 | Not Available | Positive | 2579977 - 2580450 | 17575.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
