Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trab/gumn family protein | SB49_RS11410 | Not Available | Positive | 2559278 - 2562796 | 136283.0 |
| n-acetylmuramoyl-l-alanine amidase-like domain-containing protein | SB49_RS11415 | Not Available | Positive | 2562807 - 2563655 | 31668.2 |
| hypothetical protein | SB49_RS11420 | Not Available | Negative | 2563893 - 2564297 | 15866.6 |
| chromate efflux transporter | SB49_RS11425 | Not Available | Negative | 2564330 - 2565451 | 40447.1 |
| m24 family metallopeptidase | SB49_RS11430 | Not Available | Negative | 2565524 - 2566198 | 26214.8 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | SB49_RS11435 | Not Available | Negative | 2566217 - 2567644 | 54053.1 |
| zinc-dependent alcohol dehydrogenase family protein | SB49_RS11440 | Not Available | Negative | 2568005 - 2569045 | 37332.4 |
| hypothetical protein | SB49_RS11445 | Not Available | Negative | 2569210 - 2569572 | 13258.9 |
| arac family transcriptional regulator | SB49_RS11450 | Not Available | Negative | 2569979 - 2570869 | 34037.1 |
| glutamyl-trna reductase | SB49_RS11455 | Not Available | Positive | 2571074 - 2572330 | 47462.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
