Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arc family dna-binding protein | SB49_RS15835 | Not Available | Negative | 246518 - 246682 | 6412.89 |
| alpha/beta hydrolase | SB49_RS01085 | Not Available | Negative | 246685 - 247611 | 34431.9 |
| duf6141 family protein | SB49_RS16160 | Not Available | Negative | 247781 - 248293 | 19785.5 |
| spfh domain-containing protein | SB49_RS01095 | Not Available | Negative | 248297 - 249157 | 31910.0 |
| transglycosylase domain-containing protein | SB49_RS01100 | Not Available | Negative | 249253 - 251460 | 82533.0 |
| s1/p1 nuclease | SB49_RS01105 | Not Available | Positive | 251664 - 252434 | 29313.6 |
| alpha-ketoglutarate-dependent dioxygenase alkb | SB49_RS01110 | Not Available | Negative | 252507 - 253106 | 23301.9 |
| arac family transcriptional regulator | SB49_RS01115 | Not Available | Negative | 253106 - 253978 | 33135.6 |
| hypothetical protein | SB49_RS01120 | Not Available | Positive | 254193 - 254573 | 14150.1 |
| duf885 family protein | SB49_RS01125 | Not Available | Negative | 254615 - 256411 | 69050.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
