Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pa0069 family radical sam protein | SB49_RS11360 | Not Available | Negative | 2543348 - 2544424 | 40638.1 |
| hypothetical protein | SB49_RS11365 | Not Available | Negative | 2544472 - 2546022 | 60156.3 |
| enoyl-coa hydratase/isomerase family protein | SB49_RS11370 | Not Available | Negative | 2546046 - 2546828 | 27826.7 |
| atp-binding protein | SB49_RS11375 | Not Available | Negative | 2546906 - 2548312 | 53399.1 |
| copd family protein | SB49_RS11380 | Not Available | Negative | 2548437 - 2548988 | 21803.6 |
| vps10 domain-containing protein | SB49_RS11385 | Not Available | Negative | 2549085 - 2552216 | 115422.0 |
| vps10 domain-containing protein | SB49_RS11390 | Not Available | Negative | 2552293 - 2555427 | 116729.0 |
| mate family efflux transporter | SB49_RS11395 | Not Available | Negative | 2555477 - 2556868 | 50140.1 |
| ferrochelatase | SB49_RS11400 | Not Available | Negative | 2556868 - 2557899 | 39630.8 |
| mechanosensitive ion channel family protein | SB49_RS11405 | Not Available | Positive | 2558086 - 2559174 | 41190.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
