Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dinb family protein | SB49_RS11265 | Not Available | Negative | 2522639 - 2523082 | 18025.3 |
| sugar phosphate isomerase/epimerase | SB49_RS11270 | Not Available | Negative | 2523097 - 2524098 | 37001.7 |
| gmc oxidoreductase | SB49_RS11275 | Not Available | Positive | 2524236 - 2525948 | 64175.6 |
| gluconate 2-dehydrogenase subunit 3 family protein | SB49_RS11280 | Not Available | Positive | 2525948 - 2526595 | 23908.6 |
| ribonucleoside-diphosphate reductase subunit alpha | SB49_RS11285 | Not Available | Negative | 2527020 - 2529503 | 93653.3 |
| ribonucleotide-diphosphate reductase subunit beta | SB49_RS11290 | Not Available | Negative | 2529715 - 2530701 | 38316.6 |
| hypothetical protein | SB49_RS16040 | Not Available | Negative | 2531322 - 2531498 | 6504.16 |
| lyttr family dna-binding domain-containing protein | SB49_RS11295 | Not Available | Positive | 2531903 - 2532637 | 28177.0 |
| tetratricopeptide repeat protein | SB49_RS11300 | Not Available | Positive | 2532657 - 2534624 | 74973.5 |
| duf3109 family protein | SB49_RS11305 | Not Available | Negative | 2534617 - 2535186 | 21154.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
