Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent transcriptional regulator | SB49_RS11065 | Not Available | Negative | 2478231 - 2478884 | 24610.6 |
| tonb-dependent receptor | SB49_RS11070 | Not Available | Positive | 2478964 - 2481267 | 86052.9 |
| thioredoxin family protein | SB49_RS11075 | Not Available | Positive | 2481270 - 2481752 | 18657.5 |
| lycopene cyclase family protein | SB49_RS11080 | Not Available | Positive | 2481893 - 2483035 | 44243.3 |
| gnat family acetyltransferase | SB49_RS11085 | Not Available | Positive | 2483064 - 2483636 | 21903.3 |
| polyprenyl synthetase family protein | SB49_RS11090 | Not Available | Negative | 2483660 - 2484634 | 36823.3 |
| tetr/acrr family transcriptional regulator | SB49_RS11095 | Not Available | Positive | 2484794 - 2485399 | 23598.8 |
| tolc family protein | SB49_RS11100 | Not Available | Positive | 2485400 - 2486737 | 50294.5 |
| efflux rnd transporter periplasmic adaptor subunit | SB49_RS11105 | Not Available | Positive | 2486778 - 2487947 | 42834.3 |
| efflux rnd transporter permease subunit | SB49_RS11110 | Not Available | Positive | 2487954 - 2491427 | 129549.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
