Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitroreductase | SB49_RS10970 | Not Available | Negative | 2456651 - 2457205 | 21039.2 |
| fdhf/ydep family oxidoreductase | SB49_RS10975 | Not Available | Positive | 2457389 - 2459686 | 84495.8 |
| dmt family transporter | SB49_RS10980 | Not Available | Negative | 2459716 - 2460609 | 33461.1 |
| vps10 domain-containing protein | SB49_RS10985 | Not Available | Positive | 2460893 - 2464153 | 120598.0 |
| nudix hydrolase | SB49_RS10990 | Not Available | Negative | 2464208 - 2464684 | 17827.3 |
| Trna-asn | Not Available | Not Available | Positive | 2464881 - 2464957 | Not Available |
| rip metalloprotease rsep | SB49_RS11000 | Not Available | Negative | 2465039 - 2466394 | 50294.6 |
| sco family protein | SB49_RS11005 | Not Available | Positive | 2466554 - 2467228 | 25820.3 |
| feoa family protein | SB49_RS11010 | Not Available | Positive | 2467317 - 2467562 | 8941.14 |
| ferrous iron transport protein b | SB49_RS11015 | Not Available | Positive | 2467559 - 2469778 | 83027.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
