Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SB49_RS10920 | Not Available | Positive | 2448632 - 2449078 | 17395.2 |
| duf6730 family protein | SB49_RS10925 | Not Available | Negative | 2449463 - 2449936 | 18992.8 |
| relaxase/mobilization nuclease domain-containing protein | SB49_RS10930 | Not Available | Negative | 2449949 - 2450818 | 32874.6 |
| mobilization protein mbpa | SB49_RS10935 | Not Available | Negative | 2450818 - 2451120 | 12024.7 |
| toprim domain-containing protein | SB49_RS10940 | Not Available | Negative | 2451117 - 2452073 | 36348.4 |
| primase-helicase family protein | SB49_RS10945 | Not Available | Negative | 2452281 - 2453486 | 47070.5 |
| alpa family transcriptional regulator | SB49_RS10950 | Not Available | Negative | 2453559 - 2453828 | 10367.7 |
| site-specific integrase | SB49_RS10955 | Not Available | Negative | 2454244 - 2455512 | 49743.1 |
| Trna-arg | Not Available | Not Available | Positive | 2455749 - 2455820 | Not Available |
| giy-yig nuclease family protein | SB49_RS10965 | Not Available | Negative | 2456229 - 2456513 | 11231.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
