Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ix secretion system membrane protein porp/sprf | SB49_RS01035 | Not Available | Positive | 237481 - 238443 | 35835.4 |
| isopentenyl-diphosphate delta-isomerase | SB49_RS01040 | Not Available | Positive | 238548 - 239075 | 20456.2 |
| 6-carboxytetrahydropterin synthase | SB49_RS01045 | Not Available | Positive | 239078 - 239485 | 15509.4 |
| peroxiredoxin | SB49_RS01050 | Not Available | Positive | 239489 - 239950 | 17183.7 |
| type i phosphomannose isomerase catalytic subunit | SB49_RS01055 | Not Available | Positive | 239953 - 240915 | 35753.5 |
| hypothetical protein | SB49_RS01060 | Not Available | Positive | 241063 - 241332 | 9947.82 |
| duf4369 domain-containing protein | SB49_RS01065 | Not Available | Negative | 241392 - 242099 | 26769.9 |
| duf819 domain-containing protein | SB49_RS01070 | Not Available | Negative | 242144 - 243406 | 44896.1 |
| cof-type had-iib family hydrolase | SB49_RS01075 | Not Available | Negative | 243439 - 244242 | 30396.7 |
| duf5916 domain-containing protein | SB49_RS01080 | Not Available | Negative | 244244 - 246445 | 84466.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
