Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyhypusine synthase family protein | SB49_RS10755 | Not Available | Negative | 2421119 - 2422096 | 36916.0 |
| agmatinase | SB49_RS10760 | Not Available | Negative | 2422083 - 2423027 | 35304.2 |
| arginine decarboxylase | SB49_RS10765 | Not Available | Negative | 2423014 - 2424414 | 54366.6 |
| hypothetical protein | SB49_RS10775 | Not Available | Positive | 2424846 - 2425571 | 27889.6 |
| bifunctional molybdenum cofactor biosynthesis protein moac/moab | SB49_RS10780 | Not Available | Negative | 2425575 - 2426483 | 33111.4 |
| molybdenum cofactor biosynthesis protein moae | SB49_RS10785 | Not Available | Negative | 2426486 - 2426929 | 16735.1 |
| gephyrin-like molybdotransferase glp | SB49_RS10790 | Not Available | Negative | 2427001 - 2428179 | 42156.5 |
| bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase | SB49_RS10795 | Not Available | Negative | 2428149 - 2428787 | 24211.1 |
| duf4202 domain-containing protein | SB49_RS10800 | Not Available | Negative | 2428883 - 2429473 | 23348.2 |
| hypothetical protein | SB49_RS10805 | Not Available | Negative | 2429772 - 2430176 | 16217.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
