Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m28 family peptidase | SB49_RS10705 | Not Available | Positive | 2412037 - 2414316 | 85688.8 |
| sdr family oxidoreductase | SB49_RS10710 | Not Available | Positive | 2414309 - 2415118 | 29950.2 |
| hypothetical protein | SB49_RS10715 | Not Available | Positive | 2415233 - 2415973 | 27397.7 |
| nuclear transport factor 2 family protein | SB49_RS10720 | Not Available | Negative | 2416036 - 2416542 | 19167.9 |
| hypothetical protein | SB49_RS10725 | Not Available | Negative | 2416529 - 2417029 | 18858.6 |
| nad-dependent epimerase/dehydratase family protein | SB49_RS10730 | Not Available | Positive | 2417094 - 2418035 | 35389.2 |
| 30s ribosomal protein s6--l-glutamate ligase | SB49_RS10735 | Not Available | Negative | 2418036 - 2419406 | 50556.5 |
| voc family protein | SB49_RS10740 | Not Available | Negative | 2419470 - 2419886 | 16081.8 |
| rmd1 family protein | SB49_RS10745 | Not Available | Negative | 2420011 - 2420796 | 30552.1 |
| hypothetical protein | SB49_RS10750 | Not Available | Negative | 2420802 - 2421116 | 12053.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
