Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | SB49_RS10660 | Not Available | Positive | 2406207 - 2406770 | 21583.0 |
| carboxymuconolactone decarboxylase family protein | SB49_RS10665 | Not Available | Positive | 2406838 - 2407386 | 20363.3 |
| ethd family reductase | SB49_RS10670 | Not Available | Positive | 2407495 - 2407821 | 11733.0 |
| dsba family oxidoreductase | SB49_RS10675 | Not Available | Positive | 2407811 - 2408452 | 24161.7 |
| lmo0937 family membrane protein | SB49_RS15980 | Not Available | Negative | 2408600 - 2408767 | 5902.9 |
| hypothetical protein | SB49_RS10680 | Not Available | Positive | 2408967 - 2409362 | 14558.3 |
| (4fe-4s)-binding protein | SB49_RS10685 | Not Available | Positive | 2409500 - 2409937 | 16488.6 |
| chan family lipoprotein | SB49_RS10690 | Not Available | Positive | 2409996 - 2410850 | 32498.4 |
| hypothetical protein | SB49_RS10695 | Not Available | Positive | 2410909 - 2411259 | 13910.7 |
| cbs domain-containing protein | SB49_RS10700 | Not Available | Negative | 2411348 - 2411812 | 17566.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
