Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein | SB49_RS10610 | Not Available | Negative | 2394886 - 2395707 | 30780.5 |
| universal stress protein | SB49_RS10615 | Not Available | Negative | 2395884 - 2396723 | 31820.4 |
| porin | SB49_RS10620 | Not Available | Positive | 2397013 - 2398206 | 45614.6 |
| class i sam-dependent methyltransferase | SB49_RS10625 | Not Available | Negative | 2398381 - 2399058 | 24971.4 |
| arac family transcriptional regulator | SB49_RS10630 | Not Available | Negative | 2399272 - 2400192 | 34900.1 |
| aldehyde dehydrogenase family protein | SB49_RS10635 | Not Available | Positive | 2400362 - 2401861 | 55314.9 |
| duf779 domain-containing protein | SB49_RS10640 | Not Available | Positive | 2401921 - 2402274 | 13261.7 |
| duf2914 domain-containing protein | SB49_RS10645 | Not Available | Positive | 2402755 - 2403870 | 43545.5 |
| helix-turn-helix domain-containing protein | SB49_RS10650 | Not Available | Positive | 2404004 - 2404543 | 20203.5 |
| serine hydrolase | SB49_RS10655 | Not Available | Positive | 2404633 - 2406096 | 55672.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
