Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6090 family protein | SB49_RS10560 | Not Available | Positive | 2382675 - 2383430 | 28838.1 |
| duf6090 family protein | SB49_RS10565 | Not Available | Positive | 2383446 - 2384726 | 48938.5 |
| duf6090 family protein | SB49_RS10570 | Not Available | Positive | 2384833 - 2385546 | 27789.9 |
| alkaline phosphatase pafa | SB49_RS10575 | Not Available | Positive | 2385785 - 2387476 | 62996.9 |
| hypothetical protein | SB49_RS10580 | Not Available | Negative | 2387479 - 2388540 | 41258.0 |
| hypothetical protein | SB49_RS10585 | Not Available | Positive | 2388626 - 2389315 | 26929.9 |
| pas domain-containing hybrid sensor histidine kinase/response regulator | SB49_RS10590 | Not Available | Positive | 2389824 - 2391395 | 60358.4 |
| type ii caax prenyl endopeptidase rce1 family protein | SB49_RS10595 | Not Available | Positive | 2391754 - 2392572 | 31225.4 |
| class i sam-dependent methyltransferase | SB49_RS10600 | Not Available | Positive | 2392702 - 2393346 | 24726.0 |
| cation:proton antiporter | SB49_RS10605 | Not Available | Negative | 2393417 - 2394664 | 43541.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
