Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine--trna ligase | SB49_RS10510 | Not Available | Positive | 2372043 - 2374112 | 77921.5 |
| giy-yig nuclease family protein | SB49_RS10515 | Not Available | Positive | 2374306 - 2374665 | 13859.6 |
| tex family protein | SB49_RS10520 | Not Available | Positive | 2375004 - 2377127 | 78793.8 |
| histone deacetylase | SB49_RS10525 | Not Available | Positive | 2377156 - 2378058 | 33841.1 |
| phosphatase pap2 family protein | SB49_RS10530 | Not Available | Positive | 2378080 - 2378913 | 31276.2 |
| hypothetical protein | SB49_RS16215 | Not Available | Positive | 2378992 - 2379183 | 7319.22 |
| hypothetical protein | SB49_RS10540 | Not Available | Negative | 2379233 - 2379673 | 17304.0 |
| m20/m25/m40 family metallo-hydrolase | SB49_RS10545 | Not Available | Positive | 2379835 - 2381391 | 57865.7 |
| single-stranded dna-binding protein | SB49_RS10550 | Not Available | Negative | 2381464 - 2381796 | 12393.8 |
| voc family protein | SB49_RS10555 | Not Available | Positive | 2382086 - 2382514 | 15738.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
