Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit beta' | SB49_RS00985 | Not Available | Positive | 199861 - 204159 | 159825.0 |
| duf3467 domain-containing protein | SB49_RS00990 | Not Available | Positive | 204166 - 204477 | 11503.7 |
| peptide chain release factor 3 | SB49_RS00995 | Not Available | Negative | 204538 - 206127 | 60498.7 |
| gliding motility-associated c-terminal domain-containing protein | SB49_RS15830 | Not Available | Positive | 206631 - 212063 | 191533.0 |
| type ix secretion system membrane protein porp/sprf | SB49_RS01005 | Not Available | Positive | 212079 - 213032 | 35416.8 |
| ompa family protein | SB49_RS01010 | Not Available | Positive | 213043 - 214980 | 72655.3 |
| hypothetical protein | SB49_RS01015 | Not Available | Positive | 215295 - 216971 | 58573.2 |
| s-layer family protein | SB49_RS01020 | Not Available | Positive | 217215 - 220982 | 130654.0 |
| hypothetical protein | SB49_RS01025 | Not Available | Positive | 221615 - 235414 | 473122.0 |
| gliding motility-associated c-terminal domain-containing protein | SB49_RS01030 | Not Available | Positive | 235488 - 237476 | 71448.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
