Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pirin family protein | SB49_RS10310 | Not Available | Negative | 2328106 - 2328828 | 26885.8 |
| Trna-leu | Not Available | Not Available | Positive | 2328977 - 2329060 | Not Available |
| ribose-phosphate pyrophosphokinase | SB49_RS10320 | Not Available | Positive | 2329195 - 2330136 | 34684.1 |
| 50s ribosomal protein l25/general stress protein ctc | SB49_RS10325 | Not Available | Positive | 2330192 - 2330833 | 23099.6 |
| aminoacyl-trna hydrolase | SB49_RS10330 | Not Available | Positive | 2330915 - 2331544 | 23635.4 |
| hypothetical protein | SB49_RS10335 | Not Available | Negative | 2331555 - 2332235 | 24918.1 |
| reprolysin-like metallopeptidase | SB49_RS10340 | Not Available | Negative | 2332232 - 2336008 | 135863.0 |
| bifunctional riboflavin kinase/fad synthetase | SB49_RS10345 | Not Available | Positive | 2336061 - 2336987 | 35022.4 |
| httm domain-containing protein | SB49_RS10350 | Not Available | Positive | 2336988 - 2338313 | 51449.8 |
| serine--trna ligase | SB49_RS10355 | Not Available | Positive | 2338410 - 2339681 | 47526.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
