Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase family protein | SB49_RS10210 | Not Available | Positive | 2300870 - 2302048 | 43273.1 |
| response regulator | SB49_RS10215 | Not Available | Negative | 2302052 - 2304112 | 78471.7 |
| phosphoenolpyruvate carboxylase | SB49_RS10220 | Not Available | Negative | 2304459 - 2307008 | 97866.6 |
| cia30 family protein | SB49_RS10225 | Not Available | Negative | 2307304 - 2307834 | 20189.4 |
| dienelactone hydrolase family protein | SB49_RS10230 | Not Available | Negative | 2307924 - 2308811 | 33155.6 |
| mechanosensitive ion channel family protein | SB49_RS10235 | Not Available | Negative | 2308843 - 2309703 | 32145.7 |
| penicillin acylase family protein | SB49_RS10240 | Not Available | Negative | 2309860 - 2312250 | 89555.2 |
| dna polymerase iii subunit alpha | SB49_RS10245 | Not Available | Negative | 2312764 - 2315763 | 114971.0 |
| dna polymerase iv | SB49_RS10250 | Not Available | Negative | 2315823 - 2317037 | 45534.7 |
| hypothetical protein | SB49_RS10255 | Not Available | Negative | 2317335 - 2317655 | 12839.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
