Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome-c oxidase, cbb3-type subunit i | SB49_RS10065 | Not Available | Positive | 2271091 - 2273292 | 82760.0 |
| ccoq/fixq family cbb3-type cytochrome c oxidase assembly chaperone | SB49_RS10070 | Not Available | Positive | 2273296 - 2273490 | 7607.32 |
| cbb3-type cytochrome c oxidase n-terminal domain-containing protein | SB49_RS10075 | Not Available | Positive | 2273487 - 2274437 | 36081.6 |
| cytochrome c oxidase accessory protein ccog | SB49_RS10080 | Not Available | Positive | 2274482 - 2275891 | 54280.6 |
| fixh family protein | SB49_RS10085 | Not Available | Positive | 2275919 - 2276374 | 17526.0 |
| sulfite exporter taue/safe family protein | SB49_RS10090 | Not Available | Positive | 2276407 - 2277111 | 25712.1 |
| hypothetical protein | SB49_RS16210 | Not Available | Positive | 2277225 - 2277410 | 7180.81 |
| universal stress protein | SB49_RS10100 | Not Available | Negative | 2277546 - 2278367 | 30590.9 |
| oxygen-independent coproporphyrinogen iii oxidase | SB49_RS10105 | Not Available | Negative | 2278398 - 2279759 | 52734.1 |
| gfo/idh/moca family protein | SB49_RS10110 | Not Available | Negative | 2279851 - 2281209 | 50704.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
