Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urocanate hydratase | SB49_RS10010 | Not Available | Positive | 2258317 - 2260326 | 74613.9 |
| mfs transporter | SB49_RS10015 | Not Available | Positive | 2260523 - 2261842 | 48197.7 |
| formimidoylglutamase | SB49_RS10020 | Not Available | Positive | 2261899 - 2262885 | 36710.6 |
| homogentisate 1,2-dioxygenase | SB49_RS10025 | Not Available | Negative | 2262867 - 2264024 | 44662.2 |
| nad(p)/fad-dependent oxidoreductase | SB49_RS10035 | Not Available | Negative | 2264324 - 2265601 | 47994.3 |
| hypothetical protein | SB49_RS10040 | Not Available | Positive | 2265819 - 2267024 | 45423.9 |
| hypothetical protein | SB49_RS10045 | Not Available | Positive | 2267091 - 2267321 | 8836.87 |
| universal stress protein | SB49_RS10050 | Not Available | Negative | 2267311 - 2268213 | 33846.1 |
| heavy metal translocating p-type atpase metal-binding domain-containing protein | SB49_RS10055 | Not Available | Positive | 2268403 - 2270778 | 88731.1 |
| cbb3-type cytochrome oxidase assembly protein ccos | SB49_RS10060 | Not Available | Positive | 2270883 - 2271086 | 7615.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
