Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | SB49_RS09960 | Not Available | Positive | 2239973 - 2241586 | 58659.4 |
| vcbs repeat-containing protein | SB49_RS09965 | Not Available | Positive | 2241813 - 2245118 | 123993.0 |
| vcbs repeat-containing protein | SB49_RS09970 | Not Available | Positive | 2245124 - 2248483 | 124832.0 |
| vcbs repeat-containing protein | SB49_RS09975 | Not Available | Positive | 2248476 - 2251736 | 121293.0 |
| vanadium-dependent haloperoxidase | SB49_RS09980 | Not Available | Positive | 2251733 - 2253082 | 50674.3 |
| hypothetical protein | SB49_RS09985 | Not Available | Positive | 2253087 - 2253977 | 34253.7 |
| duf456 domain-containing protein | SB49_RS09990 | Not Available | Positive | 2253990 - 2254505 | 18464.8 |
| lysr family transcriptional regulator | SB49_RS09995 | Not Available | Negative | 2254498 - 2255397 | 34155.7 |
| histidine ammonia-lyase | SB49_RS10000 | Not Available | Positive | 2255477 - 2257057 | 57255.5 |
| imidazolonepropionase | SB49_RS10005 | Not Available | Positive | 2257059 - 2258315 | 45192.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
