Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tspo/mbr family protein | SB49_RS09910 | Not Available | Positive | 2224999 - 2225472 | 18217.0 |
| nad(p)/fad-dependent oxidoreductase | SB49_RS09915 | Not Available | Negative | 2225553 - 2226818 | 46449.0 |
| glycerophosphodiester phosphodiesterase family protein | SB49_RS09920 | Not Available | Negative | 2226818 - 2227507 | 26010.3 |
| hypothetical protein | SB49_RS09925 | Not Available | Positive | 2227771 - 2228184 | 14719.2 |
| alpha-amylase family glycosyl hydrolase | SB49_RS09930 | Not Available | Negative | 2228293 - 2230173 | 72038.2 |
| glycoside hydrolase family 13 protein | SB49_RS09935 | Not Available | Negative | 2230234 - 2232081 | 71422.5 |
| glycoside hydrolase family 65 protein | SB49_RS09940 | Not Available | Negative | 2232116 - 2234428 | 88660.7 |
| beta-phosphoglucomutase | SB49_RS09945 | Not Available | Negative | 2234430 - 2235086 | 24203.0 |
| laci family dna-binding transcriptional regulator | SB49_RS09950 | Not Available | Negative | 2235427 - 2236443 | 38135.8 |
| susc/raga family tonb-linked outer membrane protein | SB49_RS09955 | Not Available | Positive | 2236830 - 2239955 | 110606.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
