Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1348 family protein | SB49_RS00055 | Not Available | Negative | 8125 - 8598 | 17823.9 |
| hypothetical protein | SB49_RS00060 | Not Available | Negative | 8763 - 9176 | 15826.8 |
| toxin-antitoxin system ywqk family antitoxin | SB49_RS00065 | Not Available | Negative | 9371 - 9955 | 22558.4 |
| hypothetical protein | SB49_RS00070 | Not Available | Negative | 10113 - 10724 | 23498.7 |
| m23 family metallopeptidase | SB49_RS00075 | Not Available | Negative | 10923 - 11897 | 37228.2 |
| nuclear transport factor 2 family protein | SB49_RS00080 | Not Available | Negative | 12083 - 12490 | 14762.4 |
| amidohydrolase family protein | SB49_RS00085 | Not Available | Negative | 12670 - 14103 | 54144.9 |
| pd40 domain-containing protein | SB49_RS00090 | Not Available | Negative | 14248 - 15207 | 36740.2 |
| transglycosylase slt domain-containing protein | SB49_RS00095 | Not Available | Negative | 15512 - 16951 | 55880.2 |
| cdgsh iron-sulfur domain-containing protein | SB49_RS00100 | Not Available | Negative | 17253 - 17888 | 23266.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
