Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase family protein | SB49_RS09860 | Not Available | Positive | 2214686 - 2215810 | 41449.9 |
| glutamate 5-kinase | SB49_RS09865 | Not Available | Positive | 2215874 - 2216635 | 27995.5 |
| acetylornithine carbamoyltransferase | SB49_RS09870 | Not Available | Positive | 2216641 - 2217582 | 35066.9 |
| acetylglutamate kinase | SB49_RS09875 | Not Available | Positive | 2217592 - 2218371 | 27964.0 |
| m20 family metallo-hydrolase | SB49_RS09880 | Not Available | Positive | 2218368 - 2219438 | 39246.3 |
| argininosuccinate lyase | SB49_RS09885 | Not Available | Positive | 2219500 - 2220771 | 47488.6 |
| pseudouridine synthase | SB49_RS09890 | Not Available | Negative | 2220846 - 2221688 | 31517.1 |
| geranylgeranylglycerol-phosphate geranylgeranyltransferase | SB49_RS09895 | Not Available | Negative | 2221897 - 2222802 | 34489.0 |
| mevalonate kinase | SB49_RS09900 | Not Available | Negative | 2222814 - 2223752 | 34598.8 |
| diphosphomevalonate/mevalonate 3,5-bisphosphate decarboxylase family protein | SB49_RS09905 | Not Available | Negative | 2223823 - 2224905 | 40605.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
